Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.27□□□□□ -0.12
Ctr9Q62018 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Ctr9Q62018 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Ctr9Q62018 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.27□□□□□ -0.12
Ctr9Q62018 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.27□□□□□ -0.12
Ctr9Q62018 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.27□□□□□ -0.12
Ctr9Q62018 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.27□□□□□ -0.12
Ctr9Q62018 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ctr9Q62018 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.27□□□□□ -0.13
Ctr9Q62018 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.27□□□□□ -0.13
Ctr9Q62018 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.27□□□□□ -0.13
Ctr9Q62018 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.27□□□□□ -0.13
Ctr9Q62018 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.27□□□□□ -0.13
Ctr9Q62018 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Gm270-201ENSMUST00000223010 976 ntBASIC14.27□□□□□ -0.13
Ctr9Q62018 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.27□□□□□ -0.13
Ctr9Q62018 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ctr9Q62018 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.27□□□□□ -0.13
Ctr9Q62018 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctr9Q62018 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ctr9Q62018 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm11511-201ENSMUST00000118146 540 ntBASIC14.26□□□□□ -0.13
Ctr9Q62018 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm18038-201ENSMUST00000197900 485 ntBASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctr9Q62018 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ctr9Q62018 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm26286-201ENSMUST00000104166 134 ntBASIC14.25□□□□□ -0.13
Ctr9Q62018 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm15515-201ENSMUST00000117827 822 ntBASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm18893-201ENSMUST00000198416 943 ntBASIC14.25□□□□□ -0.13
Ctr9Q62018 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.25□□□□□ -0.13
Ctr9Q62018 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ctr9Q62018 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctr9Q62018 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms