Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm28686-201ENSMUST00000187404 609 ntBASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Gm5599-201ENSMUST00000209602 788 ntBASIC21.02■□□□□ 0.96
Trim41Q5NCC3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 AC129219.2-201ENSMUST00000224324 701 ntBASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Gm10305-201ENSMUST00000195331 2475 ntBASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim41Q5NCC3 Gm10152-201ENSMUST00000193475 1344 ntBASIC21.02■□□□□ 0.95
Trim41Q5NCC3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim41Q5NCC3 Ssr1-203ENSMUST00000225246 1825 ntBASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm37513-201ENSMUST00000194830 2268 ntBASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm38378-201ENSMUST00000195153 2268 ntBASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm13019-201ENSMUST00000120000 276 ntBASIC21.01■□□□□ 0.95
Trim41Q5NCC3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim41Q5NCC3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 AC137950.2-202ENSMUST00000227150 1635 ntBASIC21■□□□□ 0.95
Trim41Q5NCC3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC21■□□□□ 0.95
Trim41Q5NCC3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Gm11663-201ENSMUST00000117888 290 ntBASIC21■□□□□ 0.95
Trim41Q5NCC3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim41Q5NCC3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim41Q5NCC3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Gm7002-201ENSMUST00000221386 2165 ntBASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Gm11660-201ENSMUST00000120955 412 ntBASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Gm43854-201ENSMUST00000200418 394 ntBASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim41Q5NCC3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms