Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.03□□□□□ -0.64
Scn1bP97952 Gm5866-201ENSMUST00000177881 973 ntBASIC11.03□□□□□ -0.64
Scn1bP97952 Auts2-212ENSMUST00000178555 309 ntBASIC11.03□□□□□ -0.64
Scn1bP97952 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Gm44882-201ENSMUST00000205702 802 ntBASIC11.03□□□□□ -0.64
Scn1bP97952 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.03□□□□□ -0.64
Scn1bP97952 Itm2b-204ENSMUST00000228637 783 ntBASIC11.03□□□□□ -0.64
Scn1bP97952 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.03□□□□□ -0.64
Scn1bP97952 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.02□□□□□ -0.64
Scn1bP97952 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Scn1bP97952 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Scn1bP97952 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Scn1bP97952 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scn1bP97952 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Scn1bP97952 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Gm7488-201ENSMUST00000117148 684 ntBASIC11.02□□□□□ -0.65
Scn1bP97952 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.02□□□□□ -0.65
Scn1bP97952 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Gm27437-201ENSMUST00000183429 107 ntBASIC11.02□□□□□ -0.65
Scn1bP97952 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.02□□□□□ -0.65
Scn1bP97952 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.02□□□□□ -0.65
Scn1bP97952 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.02□□□□□ -0.65
Scn1bP97952 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.02□□□□□ -0.65
Scn1bP97952 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Scn1bP97952 Gm18624-201ENSMUST00000220966 658 ntBASIC11.02□□□□□ -0.65
Scn1bP97952 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scn1bP97952 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scn1bP97952 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scn1bP97952 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Scn1bP97952 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.01□□□□□ -0.65
Scn1bP97952 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.01□□□□□ -0.65
Scn1bP97952 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.01□□□□□ -0.65
Scn1bP97952 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.01□□□□□ -0.65
Scn1bP97952 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.01□□□□□ -0.65
Scn1bP97952 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Scn1bP97952 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scn1bP97952 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Scn1bP97952 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.01□□□□□ -0.65
Scn1bP97952 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.01□□□□□ -0.65
Scn1bP97952 Gm44397-201ENSMUST00000195950 113 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms