Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.05□□□□□ -0.32
Nub1P54729 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Gm27320-201ENSMUST00000184892 109 ntBASIC13.05□□□□□ -0.32
Nub1P54729 AA914427-201ENSMUST00000193194 1166 ntBASIC13.05□□□□□ -0.32
Nub1P54729 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.05□□□□□ -0.32
Nub1P54729 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.05□□□□□ -0.32
Nub1P54729 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nub1P54729 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Nub1P54729 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.04□□□□□ -0.32
Nub1P54729 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nub1P54729 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Gm27390-201ENSMUST00000184516 176 ntBASIC13.04□□□□□ -0.32
Nub1P54729 Gm38317-201ENSMUST00000195564 343 ntBASIC13.04□□□□□ -0.32
Nub1P54729 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Gm6082-201ENSMUST00000215204 454 ntBASIC13.04□□□□□ -0.32
Nub1P54729 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.04□□□□□ -0.32
Nub1P54729 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nub1P54729 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Nub1P54729 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.03□□□□□ -0.32
Nub1P54729 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.03□□□□□ -0.32
Nub1P54729 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.03□□□□□ -0.32
Nub1P54729 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.03□□□□□ -0.32
Nub1P54729 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.03□□□□□ -0.32
Nub1P54729 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.03□□□□□ -0.32
Nub1P54729 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Nub1P54729 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.03□□□□□ -0.32
Nub1P54729 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.03□□□□□ -0.32
Nub1P54729 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.03□□□□□ -0.32
Nub1P54729 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.03□□□□□ -0.32
Nub1P54729 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.03□□□□□ -0.32
Nub1P54729 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.03□□□□□ -0.32
Nub1P54729 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nub1P54729 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nub1P54729 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms