Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Hmx3P42581 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Hmx3P42581 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.15□□□□□ -0.79
Hmx3P42581 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.79
Hmx3P42581 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmx3P42581 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.14□□□□□ -0.79
Hmx3P42581 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.14□□□□□ -0.79
Hmx3P42581 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Gm22119-201ENSMUST00000175594 99 ntBASIC10.14□□□□□ -0.79
Hmx3P42581 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.14□□□□□ -0.79
Hmx3P42581 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.14□□□□□ -0.79
Hmx3P42581 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.14□□□□□ -0.79
Hmx3P42581 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 AC160340.2-201ENSMUST00000220812 3675 ntBASIC10.14□□□□□ -0.79
Hmx3P42581 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmx3P42581 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hmx3P42581 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Hmx3P42581 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.13□□□□□ -0.79
Hmx3P42581 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.13□□□□□ -0.79
Hmx3P42581 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
Hmx3P42581 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.13□□□□□ -0.79
Hmx3P42581 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.13□□□□□ -0.79
Hmx3P42581 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Hmx3P42581 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Hmx3P42581 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.13□□□□□ -0.79
Hmx3P42581 Gm12138-201ENSMUST00000122180 951 ntBASIC10.13□□□□□ -0.79
Hmx3P42581 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hmx3P42581 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.13□□□□□ -0.79
Hmx3P42581 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms