Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfsf9P41274 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.58□□□□□ -0.55
Tnfsf9P41274 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfsf9P41274 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm4157-201ENSMUST00000211647 679 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm270-201ENSMUST00000223010 976 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm26448-201ENSMUST00000082446 203 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Pck2-205ENSMUST00000226352 2784 ntBASIC11.58□□□□□ -0.56
Tnfsf9P41274 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfsf9P41274 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfsf9P41274 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.57□□□□□ -0.56
Tnfsf9P41274 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm12501-201ENSMUST00000119163 529 ntBASIC11.57□□□□□ -0.56
Tnfsf9P41274 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm8956-201ENSMUST00000203939 825 ntBASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm4607-201ENSMUST00000206649 577 ntBASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm807-202ENSMUST00000224929 408 ntBASIC11.57□□□□□ -0.56
Tnfsf9P41274 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Tnfsf9P41274 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Tnfsf9P41274 Gm11331-201ENSMUST00000119764 288 ntBASIC11.56□□□□□ -0.56
Tnfsf9P41274 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms