Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Chd1P40201 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chd1P40201 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Chd1P40201 Gm44740-201ENSMUST00000205603 1614 ntBASIC17.71■□□□□ 0.42
Chd1P40201 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.71■□□□□ 0.42
Chd1P40201 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Gm15746-201ENSMUST00000120684 1027 ntBASIC17.7■□□□□ 0.42
Chd1P40201 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd1P40201 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Chd1P40201 Gm8601-201ENSMUST00000182096 909 ntBASIC17.7■□□□□ 0.42
Chd1P40201 Gm27444-201ENSMUST00000184157 137 ntBASIC17.7■□□□□ 0.42
Chd1P40201 Gm8643-201ENSMUST00000195228 625 ntBASIC17.7■□□□□ 0.42
Chd1P40201 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Gm43106-201ENSMUST00000199485 637 ntBASIC17.7■□□□□ 0.42
Chd1P40201 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd1P40201 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1P40201 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd1P40201 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd1P40201 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd1P40201 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC17.69■□□□□ 0.42
Chd1P40201 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC17.69■□□□□ 0.42
Chd1P40201 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC17.69■□□□□ 0.42
Chd1P40201 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd1P40201 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Chd1P40201 Gm5808-201ENSMUST00000178090 357 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC17.69■□□□□ 0.42
Chd1P40201 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd1P40201 AC121567.1-201ENSMUST00000227213 842 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Chd1P40201 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd1P40201 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Mir1249-201ENSMUST00000116791 98 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Gm15636-201ENSMUST00000119205 668 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Gm8302-201ENSMUST00000119217 852 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd1P40201 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Gm19927-201ENSMUST00000185792 781 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd1P40201 Zcwpw2-203ENSMUST00000187803 372 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chd1P40201 Gm6794-201ENSMUST00000203829 457 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC17.69■□□□□ 0.42
Chd1P40201 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd1P40201 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1P40201 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Chd1P40201 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd1P40201 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chd1P40201 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC17.68■□□□□ 0.42
Chd1P40201 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Chd1P40201 Gm7833-201ENSMUST00000183288 990 ntBASIC17.68■□□□□ 0.42
Chd1P40201 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC17.68■□□□□ 0.42
Chd1P40201 AC159002.1-201ENSMUST00000226714 924 ntBASIC17.68■□□□□ 0.42
Chd1P40201 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms