Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nedd8P29595 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nedd8P29595 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.11□□□□□ -0.63
Nedd8P29595 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
Nedd8P29595 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.1□□□□□ -0.63
Nedd8P29595 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.1□□□□□ -0.63
Nedd8P29595 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Nedd8P29595 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.1□□□□□ -0.63
Nedd8P29595 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm16296-201ENSMUST00000159905 325 ntBASIC11.1□□□□□ -0.63
Nedd8P29595 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm7775-201ENSMUST00000218871 853 ntBASIC11.1□□□□□ -0.63
Nedd8P29595 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.1□□□□□ -0.63
Nedd8P29595 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.1□□□□□ -0.63
Nedd8P29595 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nedd8P29595 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nedd8P29595 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.09□□□□□ -0.63
Nedd8P29595 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm15371-201ENSMUST00000117057 784 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Gm4995-201ENSMUST00000117247 432 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm25927-201ENSMUST00000175058 117 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm9022-201ENSMUST00000182482 992 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Gm8099-201ENSMUST00000200510 742 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.09□□□□□ -0.63
Nedd8P29595 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nedd8P29595 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Nedd8P29595 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.09□□□□□ -0.63
Nedd8P29595 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Nedd8P29595 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.09□□□□□ -0.63
Nedd8P29595 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nedd8P29595 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nedd8P29595 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nedd8P29595 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms