Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Gm15573-201ENSMUST00000119487 540 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Gm15566-201ENSMUST00000121130 590 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Gm17391-201ENSMUST00000171036 126 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Gm3508-201ENSMUST00000186012 792 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Gm9540-201ENSMUST00000188230 478 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.29□□□□□ -0.44
Hmga1P17095 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Gm43916-201ENSMUST00000205062 967 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.29□□□□□ -0.44
Hmga1P17095 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Hmga1P17095 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.29□□□□□ -0.44
Hmga1P17095 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmga1P17095 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmga1P17095 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmga1P17095 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmga1P17095 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm14193-201ENSMUST00000105067 153 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Hmga1P17095 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.28□□□□□ -0.44
Hmga1P17095 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Gm11956-201ENSMUST00000119525 512 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm15881-201ENSMUST00000148792 942 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.28□□□□□ -0.44
Hmga1P17095 Gm19459-201ENSMUST00000176240 835 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Gm9136-201ENSMUST00000193368 454 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm6450-201ENSMUST00000200896 574 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm42599-201ENSMUST00000201308 469 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm44126-201ENSMUST00000204831 514 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Gm8285-201ENSMUST00000208293 759 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.28□□□□□ -0.44
Hmga1P17095 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmga1P17095 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmga1P17095 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmga1P17095 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmga1P17095 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmga1P17095 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.27□□□□□ -0.44
Hmga1P17095 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.27□□□□□ -0.44
Hmga1P17095 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.27□□□□□ -0.44
Hmga1P17095 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.27□□□□□ -0.44
Hmga1P17095 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmga1P17095 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms