Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.56□□□□□ -0.56
Lire1P11260 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lire1P11260 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.56□□□□□ -0.56
Lire1P11260 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.56□□□□□ -0.56
Lire1P11260 Gm14350-201ENSMUST00000116642 640 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lire1P11260 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.56□□□□□ -0.56
Lire1P11260 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lire1P11260 Mospd4-201ENSMUST00000180618 576 ntBASIC11.56□□□□□ -0.56
Lire1P11260 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm37489-201ENSMUST00000191883 159 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.56□□□□□ -0.56
Lire1P11260 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.56□□□□□ -0.56
Lire1P11260 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.56□□□□□ -0.56
Lire1P11260 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lire1P11260 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.56□□□□□ -0.56
Lire1P11260 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lire1P11260 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.56□□□□□ -0.56
Lire1P11260 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lire1P11260 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.55□□□□□ -0.56
Lire1P11260 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Lire1P11260 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.55□□□□□ -0.56
Lire1P11260 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lire1P11260 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Gm11222-201ENSMUST00000119005 738 ntBASIC11.55□□□□□ -0.56
Lire1P11260 Gm13123-201ENSMUST00000122173 492 ntBASIC11.55□□□□□ -0.56
Lire1P11260 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lire1P11260 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Lire1P11260 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.55□□□□□ -0.56
Lire1P11260 Gm20482-202ENSMUST00000174729 825 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms