Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.43□□□□□ -0.42
Trove2O08848 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.43□□□□□ -0.42
Trove2O08848 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 Gm14921-201ENSMUST00000118643 908 ntBASIC12.43□□□□□ -0.42
Trove2O08848 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.43□□□□□ -0.42
Trove2O08848 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trove2O08848 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trove2O08848 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.43□□□□□ -0.42
Trove2O08848 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trove2O08848 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.43□□□□□ -0.42
Trove2O08848 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trove2O08848 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trove2O08848 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.42□□□□□ -0.42
Trove2O08848 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trove2O08848 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trove2O08848 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trove2O08848 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trove2O08848 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trove2O08848 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Gm4768-201ENSMUST00000206199 686 ntBASIC12.42□□□□□ -0.42
Trove2O08848 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Gm19163-201ENSMUST00000223313 780 ntBASIC12.42□□□□□ -0.42
Trove2O08848 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.42□□□□□ -0.42
Trove2O08848 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.42□□□□□ -0.42
Trove2O08848 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trove2O08848 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.42□□□□□ -0.42
Trove2O08848 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trove2O08848 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trove2O08848 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trove2O08848 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.41□□□□□ -0.42
Trove2O08848 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.41□□□□□ -0.42
Trove2O08848 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.41□□□□□ -0.42
Trove2O08848 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.41□□□□□ -0.42
Trove2O08848 Gm22121-201ENSMUST00000175148 54 ntBASIC12.41□□□□□ -0.42
Trove2O08848 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trove2O08848 Gm8602-201ENSMUST00000184045 607 ntBASIC12.41□□□□□ -0.42
Trove2O08848 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.41□□□□□ -0.42
Trove2O08848 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.41□□□□□ -0.42
Trove2O08848 Btrc-209ENSMUST00000224478 2194 ntBASIC12.41□□□□□ -0.42
Trove2O08848 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms