Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ebf3O08791 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ebf3O08791 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ebf3O08791 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Gm22133-201ENSMUST00000102082 109 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.58□□□□□ -0.4
Ebf3O08791 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ebf3O08791 Gm14058-201ENSMUST00000116082 735 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 Gm15432-201ENSMUST00000121106 195 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.58□□□□□ -0.4
Ebf3O08791 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.58□□□□□ -0.4
Ebf3O08791 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ebf3O08791 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.58□□□□□ -0.4
Ebf3O08791 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Gm19353-201ENSMUST00000184561 445 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 Gm43962-201ENSMUST00000203898 190 ntBASIC12.58□□□□□ -0.4
Ebf3O08791 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ebf3O08791 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ebf3O08791 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.58□□□□□ -0.4
Ebf3O08791 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.58□□□□□ -0.4
Ebf3O08791 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf3O08791 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm13035-201ENSMUST00000117496 342 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm18038-201ENSMUST00000197900 485 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm44958-201ENSMUST00000203734 736 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Gm17827-201ENSMUST00000211825 742 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.57□□□□□ -0.4
Ebf3O08791 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms