Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm9630-201ENSMUST00000178304 885 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Mir6359-201ENSMUST00000183668 81 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm14113-201ENSMUST00000121399 976 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm11960-201ENSMUST00000122068 925 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm16305-201ENSMUST00000140747 556 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Gm14071-201ENSMUST00000117817 509 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Gm6216-201ENSMUST00000182390 687 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a4Q9QZR9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a4Q9QZR9 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms