Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm13342-201ENSMUST00000121055 207 ntBASIC11.44□□□□□ -0.58
Upk1aQ9D132 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Upk1aQ9D132 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Gm44405-201ENSMUST00000198952 126 ntBASIC11.44□□□□□ -0.58
Upk1aQ9D132 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.44□□□□□ -0.58
Upk1aQ9D132 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.44□□□□□ -0.58
Upk1aQ9D132 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.44□□□□□ -0.58
Upk1aQ9D132 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm14247-201ENSMUST00000120950 237 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm1335-201ENSMUST00000121653 386 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm7653-201ENSMUST00000214567 508 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm10076-201ENSMUST00000073238 384 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.43□□□□□ -0.58
Upk1aQ9D132 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk1aQ9D132 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.42□□□□□ -0.58
Upk1aQ9D132 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Gm11439-201ENSMUST00000118598 409 ntBASIC11.42□□□□□ -0.58
Upk1aQ9D132 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.42□□□□□ -0.58
Upk1aQ9D132 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms