Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm18165-201ENSMUST00000217426 928 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm32025-201ENSMUST00000217960 307 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ska1Q9CPV1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Gm7029-201ENSMUST00000173226 450 ntBASIC11.45□□□□□ -0.58
Ska1Q9CPV1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Gm9022-201ENSMUST00000182482 992 ntBASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Gm29127-201ENSMUST00000188304 517 ntBASIC11.45□□□□□ -0.58
Ska1Q9CPV1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Btrc-209ENSMUST00000224478 2194 ntBASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.45□□□□□ -0.58
Ska1Q9CPV1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm1335-201ENSMUST00000121653 386 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms