Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm17221-201ENSMUST00000163909 481 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm17073-201ENSMUST00000168069 556 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm11475-201ENSMUST00000118482 476 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm13284-201ENSMUST00000121020 547 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm8756-201ENSMUST00000183250 929 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm31274-201ENSMUST00000197356 229 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh15Q99PJ1 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.33□□□□□ -0.27
Pcdh15Q99PJ1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh15Q99PJ1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh15Q99PJ1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh15Q99PJ1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh15Q99PJ1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh15Q99PJ1 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Snord23-201ENSMUST00000116828 109 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm24943-201ENSMUST00000158329 433 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm8255-201ENSMUST00000218693 305 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms