Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm13263-201ENSMUST00000121271 838 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Rprl1-201ENSMUST00000158050 327 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Mir8115-201ENSMUST00000184992 119 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm28388-201ENSMUST00000186262 437 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm5298-201ENSMUST00000201122 892 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx6-1Q99MA9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Grk6-205ENSMUST00000224653 2976 ntBASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Nkx6-1Q99MA9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx6-1Q99MA9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms