Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Mospd4-201ENSMUST00000180618 576 ntBASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm27243-201ENSMUST00000183964 521 ntBASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm10076-201ENSMUST00000073238 384 ntBASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Gm12241-201ENSMUST00000118330 726 ntBASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp1b1Q99LU0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp1b1Q99LU0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms