Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 AA914427-201ENSMUST00000193194 1166 ntBASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdha3Q91Y16 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm12015-201ENSMUST00000117065 843 ntBASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdha3Q91Y16 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms