Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm11783-201ENSMUST00000119549 885 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm11502-201ENSMUST00000120917 1211 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm9136-201ENSMUST00000193368 454 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm45113-201ENSMUST00000207518 165 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm45592-201ENSMUST00000209605 1043 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx54Q8K4L0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm14034-201ENSMUST00000120147 551 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm17192-201ENSMUST00000169031 511 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm25677-201ENSMUST00000174983 72 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm28833-201ENSMUST00000189671 559 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm43854-201ENSMUST00000200418 394 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm8436-201ENSMUST00000210152 1080 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm5749-201ENSMUST00000210673 1090 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm30671-201ENSMUST00000214898 318 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Gm6170-201ENSMUST00000187672 1388 ntBASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx54Q8K4L0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms