Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Pck2-205ENSMUST00000226352 2784 ntBASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm5733-201ENSMUST00000190232 939 ntBASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm18730-201ENSMUST00000218038 343 ntBASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gm807-202ENSMUST00000224929 408 ntBASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa4Q8CA71 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm12857-201ENSMUST00000117678 592 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm12196-201ENSMUST00000120954 262 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm23699-201ENSMUST00000158835 135 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm8194-201ENSMUST00000159783 859 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm9555-201ENSMUST00000200908 583 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm7848-201ENSMUST00000210739 718 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm10752-201ENSMUST00000218348 729 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa4Q8CA71 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa4Q8CA71 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Shisa4Q8CA71 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.96□□□□□ -0.17
Shisa4Q8CA71 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms