Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.16□□□□□ -0.3
Trim43cP86449 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim43cP86449 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.16□□□□□ -0.3
Trim43cP86449 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim43cP86449 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Olfr582-201ENSMUST00000098212 960 ntBASIC13.16□□□□□ -0.3
Trim43cP86449 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim43cP86449 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim43cP86449 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim43cP86449 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trim43cP86449 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.16□□□□□ -0.3
Trim43cP86449 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim43cP86449 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Gm14381-201ENSMUST00000122105 414 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm25890-201ENSMUST00000177643 165 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Gm22614-201ENSMUST00000178300 165 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm32999-201ENSMUST00000192693 562 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Gm37666-201ENSMUST00000194110 866 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm22042-201ENSMUST00000082989 165 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Gm26110-201ENSMUST00000083971 165 ntBASIC13.15□□□□□ -0.3
Trim43cP86449 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim43cP86449 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43cP86449 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim43cP86449 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43cP86449 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.15□□□□□ -0.31
Trim43cP86449 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43cP86449 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43cP86449 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43cP86449 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43cP86449 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43cP86449 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trim43cP86449 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.14□□□□□ -0.31
Trim43cP86449 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43cP86449 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trim43cP86449 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim43cP86449 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43cP86449 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Gm25700-201ENSMUST00000177693 110 ntBASIC13.14□□□□□ -0.31
Trim43cP86449 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim43cP86449 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms