Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.2□□□□□ -0.46
Traf2P39429 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf2P39429 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.19□□□□□ -0.46
Traf2P39429 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.19□□□□□ -0.46
Traf2P39429 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.19□□□□□ -0.46
Traf2P39429 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Gm45224-201ENSMUST00000208203 414 ntBASIC12.19□□□□□ -0.46
Traf2P39429 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.19□□□□□ -0.46
Traf2P39429 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.19□□□□□ -0.46
Traf2P39429 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf2P39429 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Traf2P39429 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Traf2P39429 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.18□□□□□ -0.46
Traf2P39429 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.18□□□□□ -0.46
Traf2P39429 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Rprl1-201ENSMUST00000158050 327 ntBASIC12.18□□□□□ -0.46
Traf2P39429 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.18□□□□□ -0.46
Traf2P39429 Gm25700-201ENSMUST00000177693 110 ntBASIC12.18□□□□□ -0.46
Traf2P39429 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.18□□□□□ -0.46
Traf2P39429 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf2P39429 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Traf2P39429 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Traf2P39429 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf2P39429 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf2P39429 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.17□□□□□ -0.46
Traf2P39429 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf2P39429 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf2P39429 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms