Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.51□□□□□ -0.57
Slc6a11P31650 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.51□□□□□ -0.57
Slc6a11P31650 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.51□□□□□ -0.57
Slc6a11P31650 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm4034-201ENSMUST00000187674 480 ntBASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.51□□□□□ -0.57
Slc6a11P31650 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Slc6a11P31650 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc6a11P31650 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm11591-201ENSMUST00000120063 702 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.5□□□□□ -0.57
Slc6a11P31650 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm7809-201ENSMUST00000153199 742 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm23119-201ENSMUST00000158610 140 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Slc6a11P31650 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Slc6a11P31650 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms