Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.02□□□□□ -0.49
Ldb2O55203 Gm27320-201ENSMUST00000184892 109 ntBASIC12.02□□□□□ -0.49
Ldb2O55203 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.02□□□□□ -0.49
Ldb2O55203 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Gm38241-201ENSMUST00000192641 898 ntBASIC12.02□□□□□ -0.49
Ldb2O55203 Gm9136-201ENSMUST00000193368 454 ntBASIC12.02□□□□□ -0.49
Ldb2O55203 Gm18893-201ENSMUST00000198416 943 ntBASIC12.02□□□□□ -0.49
Ldb2O55203 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.02□□□□□ -0.49
Ldb2O55203 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.02□□□□□ -0.49
Ldb2O55203 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.02□□□□□ -0.49
Ldb2O55203 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ldb2O55203 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ldb2O55203 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Ldb2O55203 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.01□□□□□ -0.49
Ldb2O55203 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm15610-201ENSMUST00000120584 195 ntBASIC12.01□□□□□ -0.49
Ldb2O55203 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm26083-201ENSMUST00000157904 193 ntBASIC12.01□□□□□ -0.49
Ldb2O55203 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm32999-201ENSMUST00000192693 562 ntBASIC12.01□□□□□ -0.49
Ldb2O55203 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.01□□□□□ -0.49
Ldb2O55203 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ldb2O55203 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.01□□□□□ -0.49
Ldb2O55203 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ldb2O55203 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.01□□□□□ -0.49
Ldb2O55203 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12□□□□□ -0.49
Ldb2O55203 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ldb2O55203 Gm43267-201ENSMUST00000199664 1796 ntBASIC12□□□□□ -0.49
Ldb2O55203 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12□□□□□ -0.49
Ldb2O55203 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Gm43051-201ENSMUST00000201096 2678 ntBASIC12□□□□□ -0.49
Ldb2O55203 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12□□□□□ -0.49
Ldb2O55203 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ldb2O55203 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12□□□□□ -0.49
Ldb2O55203 Gm15276-201ENSMUST00000145953 498 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms