Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
H2al1kJ3QP08 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 9330104G04Rik-202ENSMUST00000205647 1943 ntBASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Upp2-203ENSMUST00000102755 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 AC137950.2-202ENSMUST00000227150 1635 ntBASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Aldoc-201ENSMUST00000017534 2786 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
H2al1kJ3QP08 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Hnrnpk-221ENSMUST00000177497 2585 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Dag1-202ENSMUST00000166905 4244 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Pfkm-202ENSMUST00000163507 2816 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Cdh18-207ENSMUST00000226693 2165 ntBASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gm3364-201ENSMUST00000196016 1217 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
H2al1kJ3QP08 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms