Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rrp8Q9DB85 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm11956-201ENSMUST00000119525 512 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rrp8Q9DB85 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm12795-201ENSMUST00000117594 539 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm2517-201ENSMUST00000215651 348 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm10752-201ENSMUST00000218348 729 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rrp8Q9DB85 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rrp8Q9DB85 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms