Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm7Q9CQQ8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm23596-201ENSMUST00000104304 132 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm8343-201ENSMUST00000182705 994 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm21811-201ENSMUST00000096485 930 ntBASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm7Q9CQQ8 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm14247-201ENSMUST00000120950 237 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm12196-201ENSMUST00000120954 262 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm11450-201ENSMUST00000121144 333 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm25881-201ENSMUST00000157783 103 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm7848-201ENSMUST00000210739 718 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm7Q9CQQ8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm7Q9CQQ8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms