Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.28□□□□□ -0.28
Ush1gQ80T11 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.28□□□□□ -0.28
Ush1gQ80T11 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.28□□□□□ -0.28
Ush1gQ80T11 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.28□□□□□ -0.28
Ush1gQ80T11 Gm4482-201ENSMUST00000200876 742 ntBASIC13.28□□□□□ -0.28
Ush1gQ80T11 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.28□□□□□ -0.28
Ush1gQ80T11 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush1gQ80T11 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.27□□□□□ -0.28
Ush1gQ80T11 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ush1gQ80T11 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm12196-201ENSMUST00000120954 262 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm25881-201ENSMUST00000157783 103 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm8194-201ENSMUST00000159783 859 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm43184-201ENSMUST00000197247 542 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm19994-201ENSMUST00000217086 586 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.27□□□□□ -0.29
Ush1gQ80T11 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush1gQ80T11 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm24891-201ENSMUST00000104391 136 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm23085-201ENSMUST00000157849 293 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm45550-201ENSMUST00000209380 946 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.26□□□□□ -0.29
Ush1gQ80T11 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush1gQ80T11 Cog3-203ENSMUST00000227473 4197 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms