Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm14928-201ENSMUST00000120198 477 ntBASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Gm23912-201ENSMUST00000104687 87 ntBASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Gm5904-201ENSMUST00000210286 865 ntBASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scaf4Q6PFF0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms