Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm22344-201ENSMUST00000122642 278 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm16030-201ENSMUST00000159098 603 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm9162-201ENSMUST00000182081 991 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col12a1Q60847 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Col12a1Q60847 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col12a1Q60847 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm6158-201ENSMUST00000109467 904 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm14006-201ENSMUST00000122132 981 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm18035-201ENSMUST00000211962 589 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm2594-201ENSMUST00000214774 742 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.64□□□□□ -0.55
Col12a1Q60847 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm8255-201ENSMUST00000218693 305 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.64□□□□□ -0.55
Col12a1Q60847 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Mir1941-201ENSMUST00000157834 83 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm26174-201ENSMUST00000158415 219 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col12a1Q60847 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.64□□□□□ -0.55
Col12a1Q60847 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.63□□□□□ -0.55
Col12a1Q60847 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Mir874-201ENSMUST00000104769 76 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm13422-201ENSMUST00000118834 504 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm9089-201ENSMUST00000122027 526 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms