Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.29□□□□□ -0.12
Limch1Q3UH68 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Limch1Q3UH68 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.29□□□□□ -0.12
Limch1Q3UH68 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limch1Q3UH68 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm7857-201ENSMUST00000117957 358 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm22902-201ENSMUST00000158488 302 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.28□□□□□ -0.12
Limch1Q3UH68 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limch1Q3UH68 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Limch1Q3UH68 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.27□□□□□ -0.12
Limch1Q3UH68 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limch1Q3UH68 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Gm12176-201ENSMUST00000121420 875 ntBASIC14.27□□□□□ -0.13
Limch1Q3UH68 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Limch1Q3UH68 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Gm37986-201ENSMUST00000193285 383 ntBASIC14.27□□□□□ -0.13
Limch1Q3UH68 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.27□□□□□ -0.13
Limch1Q3UH68 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.27□□□□□ -0.13
Limch1Q3UH68 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.27□□□□□ -0.13
Limch1Q3UH68 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limch1Q3UH68 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms