Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pdx1P52946 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pdx1P52946 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pdx1P52946 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.98□□□□□ -0.49
Pdx1P52946 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Pdx1P52946 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Pdx1P52946 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Pdx1P52946 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.98□□□□□ -0.49
Pdx1P52946 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Pdx1P52946 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pdx1P52946 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdx1P52946 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.97□□□□□ -0.49
Pdx1P52946 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.97□□□□□ -0.49
Pdx1P52946 Gm32999-201ENSMUST00000192693 562 ntBASIC11.97□□□□□ -0.49
Pdx1P52946 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.97□□□□□ -0.49
Pdx1P52946 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.97□□□□□ -0.49
Pdx1P52946 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pdx1P52946 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pdx1P52946 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdx1P52946 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pdx1P52946 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms