Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rfx2P48379 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.73□□□□□ -0.37
Rfx2P48379 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.73□□□□□ -0.37
Rfx2P48379 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm9630-201ENSMUST00000178304 885 ntBASIC12.73□□□□□ -0.37
Rfx2P48379 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.73□□□□□ -0.37
Rfx2P48379 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.73□□□□□ -0.37
Rfx2P48379 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rfx2P48379 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.73□□□□□ -0.37
Rfx2P48379 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rfx2P48379 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx2P48379 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rfx2P48379 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm12566-201ENSMUST00000121479 359 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.72□□□□□ -0.37
Rfx2P48379 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Rfx2P48379 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Gm27627-201ENSMUST00000183644 150 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm29615-201ENSMUST00000185371 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28224-201ENSMUST00000186078 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm29001-201ENSMUST00000186177 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28292-201ENSMUST00000186593 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28101-201ENSMUST00000187608 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm29076-201ENSMUST00000187689 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28302-201ENSMUST00000187931 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28646-201ENSMUST00000188220 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28205-201ENSMUST00000189177 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm29032-201ENSMUST00000189797 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm28695-201ENSMUST00000190300 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm37448-201ENSMUST00000192795 697 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm43378-201ENSMUST00000199336 582 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm45224-201ENSMUST00000208203 414 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.72□□□□□ -0.37
Rfx2P48379 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rfx2P48379 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rfx2P48379 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx2P48379 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms