Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
VtnP29788 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
VtnP29788 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.02□□□□□ -0.65
VtnP29788 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
VtnP29788 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
VtnP29788 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.02□□□□□ -0.65
VtnP29788 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VtnP29788 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.01□□□□□ -0.65
VtnP29788 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.01□□□□□ -0.65
VtnP29788 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
VtnP29788 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
VtnP29788 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.01□□□□□ -0.65
VtnP29788 Gm12217-201ENSMUST00000118858 696 ntBASIC11.01□□□□□ -0.65
VtnP29788 Gm14277-201ENSMUST00000121195 360 ntBASIC11.01□□□□□ -0.65
VtnP29788 Gm12176-201ENSMUST00000121420 875 ntBASIC11.01□□□□□ -0.65
VtnP29788 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.01□□□□□ -0.65
VtnP29788 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Mir3547-201ENSMUST00000175461 88 ntBASIC11.01□□□□□ -0.65
VtnP29788 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Gm45224-201ENSMUST00000208203 414 ntBASIC11.01□□□□□ -0.65
VtnP29788 Gm18212-201ENSMUST00000211678 889 ntBASIC11.01□□□□□ -0.65
VtnP29788 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.01□□□□□ -0.65
VtnP29788 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.01□□□□□ -0.65
VtnP29788 Gzmn-202ENSMUST00000225535 989 ntBASIC11.01□□□□□ -0.65
VtnP29788 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.01□□□□□ -0.65
VtnP29788 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.01□□□□□ -0.65
VtnP29788 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.01□□□□□ -0.65
VtnP29788 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VtnP29788 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
VtnP29788 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11□□□□□ -0.65
VtnP29788 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11□□□□□ -0.65
VtnP29788 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11□□□□□ -0.65
VtnP29788 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
VtnP29788 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11□□□□□ -0.65
VtnP29788 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
VtnP29788 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11□□□□□ -0.65
VtnP29788 Gm4909-201ENSMUST00000118749 794 ntBASIC11□□□□□ -0.65
VtnP29788 Gm13665-201ENSMUST00000120830 528 ntBASIC11□□□□□ -0.65
VtnP29788 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11□□□□□ -0.65
VtnP29788 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
VtnP29788 Gm5070-201ENSMUST00000177599 862 ntBASIC11□□□□□ -0.65
VtnP29788 Mir6979-201ENSMUST00000183927 56 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms