Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.65□□□□□ -0.22
Sptlc1O35704 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 Gm43981-201ENSMUST00000203285 1467 ntBASIC13.65□□□□□ -0.22
Sptlc1O35704 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sptlc1O35704 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sptlc1O35704 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sptlc1O35704 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Sptlc1O35704 Gm44509-201ENSMUST00000205400 1324 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm14263-201ENSMUST00000117955 746 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm14975-201ENSMUST00000118741 664 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm5616-201ENSMUST00000165252 384 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm8741-201ENSMUST00000174736 384 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm43378-201ENSMUST00000199336 582 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 AY036118-201ENSMUST00000200021 923 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 AC096628.1-201ENSMUST00000226060 641 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 AC133517.2-201ENSMUST00000226820 690 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sptlc1O35704 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.64□□□□□ -0.23
Sptlc1O35704 Gm5605-201ENSMUST00000208940 1305 ntBASIC13.64□□□□□ -0.23
Sptlc1O35704 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm23949-201ENSMUST00000104027 127 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm15711-201ENSMUST00000118889 535 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm23119-201ENSMUST00000158610 140 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm43596-201ENSMUST00000202818 884 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm43894-201ENSMUST00000203274 688 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm44100-201ENSMUST00000204329 436 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm7848-201ENSMUST00000210739 718 ntBASIC13.63□□□□□ -0.23
Sptlc1O35704 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sptlc1O35704 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sptlc1O35704 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms