Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Alx4O35137 Gm18711-201ENSMUST00000199341 750 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.83□□□□□ -0.68
Alx4O35137 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Alx4O35137 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Alx4O35137 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.82□□□□□ -0.68
Alx4O35137 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.82□□□□□ -0.68
Alx4O35137 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Alx4O35137 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Alx4O35137 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.82□□□□□ -0.68
Alx4O35137 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Gm29649-201ENSMUST00000185649 419 ntBASIC10.82□□□□□ -0.68
Alx4O35137 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.82□□□□□ -0.68
Alx4O35137 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.82□□□□□ -0.68
Alx4O35137 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.82□□□□□ -0.68
Alx4O35137 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Alx4O35137 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Alx4O35137 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.82□□□□□ -0.68
Alx4O35137 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Alx4O35137 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Alx4O35137 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Alx4O35137 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.82□□□□□ -0.68
Alx4O35137 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.82□□□□□ -0.68
Alx4O35137 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Alx4O35137 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.81□□□□□ -0.68
Alx4O35137 Gm14928-201ENSMUST00000120198 477 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Gm15806-201ENSMUST00000120696 955 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.81□□□□□ -0.68
Alx4O35137 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms