Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.23□□□□□ -0.61
ClcnkaQ9WUB7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm11531-201ENSMUST00000117614 555 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm12241-201ENSMUST00000118330 726 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm27516-201ENSMUST00000184237 98 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm5950-201ENSMUST00000213337 772 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Gm9368-201ENSMUST00000219348 831 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClcnkaQ9WUB7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Cog3-203ENSMUST00000227473 4197 ntBASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Gm26956-201ENSMUST00000182176 986 ntBASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms