Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm25604-201ENSMUST00000158359 133 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm14274-201ENSMUST00000117182 615 ntBASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm18201-201ENSMUST00000174735 875 ntBASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm44647-201ENSMUST00000207402 428 ntBASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-4Q9EQM3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm8723-201ENSMUST00000166076 820 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm3150-201ENSMUST00000166418 204 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm8701-201ENSMUST00000169259 874 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms