Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm14247-201ENSMUST00000120950 237 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm19994-201ENSMUST00000217086 586 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm7399-201ENSMUST00000032395 858 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm19817-201ENSMUST00000199764 2132 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gm3096-201ENSMUST00000185770 364 ntBASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gm9230-201ENSMUST00000188228 532 ntBASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4bQ9D8B3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm37660-201ENSMUST00000192754 1732 ntBASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm12015-201ENSMUST00000117065 843 ntBASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm15610-201ENSMUST00000120584 195 ntBASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Gm31256-201ENSMUST00000194705 506 ntBASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms