Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Gm42937-201ENSMUST00000197360 752 ntBASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Gm18584-201ENSMUST00000203098 964 ntBASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssu72Q9CY97 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.02□□□□□ -0.48
Ssu72Q9CY97 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.02□□□□□ -0.48
Ssu72Q9CY97 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssu72Q9CY97 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ssu72Q9CY97 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.02□□□□□ -0.48
Ssu72Q9CY97 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Gm12502-201ENSMUST00000120197 444 ntBASIC12.02□□□□□ -0.49
Ssu72Q9CY97 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Gm45384-201ENSMUST00000210451 277 ntBASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Gm5356-201ENSMUST00000093326 615 ntBASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.02□□□□□ -0.49
Ssu72Q9CY97 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssu72Q9CY97 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms