Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm24255-201ENSMUST00000104481 128 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm5419-201ENSMUST00000119301 527 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm9136-201ENSMUST00000193368 454 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm38341-201ENSMUST00000195357 515 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm43758-201ENSMUST00000199500 367 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm19187-201ENSMUST00000206781 892 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm17931-201ENSMUST00000208132 634 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm11989-201ENSMUST00000117240 672 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm11362-201ENSMUST00000118838 850 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm15610-201ENSMUST00000120584 195 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.46□□□□□ -0.41
Pcdhb6Q91XZ4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb6Q91XZ4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms