Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm26448-201ENSMUST00000082446 203 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Pck2-205ENSMUST00000226352 2784 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm22144-201ENSMUST00000157402 102 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm27910-201ENSMUST00000185004 107 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm17831-201ENSMUST00000205579 900 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.03□□□□□ -0.48
Vsx1Q91V10 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx1Q91V10 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Vsx1Q91V10 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm13809-201ENSMUST00000117921 597 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm11451-201ENSMUST00000118946 630 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms