Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Gm24891-201ENSMUST00000104391 136 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm14058-201ENSMUST00000116082 735 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm11660-201ENSMUST00000120955 412 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm5706-201ENSMUST00000181525 993 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm8959-201ENSMUST00000213150 571 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 CT572999.1-201ENSMUST00000220315 1260 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TraipQ8VIG6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TraipQ8VIG6 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.02□□□□□ -0.33
TraipQ8VIG6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm11509-201ENSMUST00000117358 325 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm20426-201ENSMUST00000173657 440 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm5733-201ENSMUST00000190232 939 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm18893-201ENSMUST00000198416 943 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm3786-201ENSMUST00000202659 378 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.01□□□□□ -0.33
TraipQ8VIG6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.01□□□□□ -0.33
TraipQ8VIG6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Mir680-2-201ENSMUST00000102163 110 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Gm23251-201ENSMUST00000103773 110 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Gm15074-201ENSMUST00000117603 936 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Gm14263-201ENSMUST00000117955 746 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13□□□□□ -0.33
TraipQ8VIG6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms