Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm9630-201ENSMUST00000178304 885 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm4034-201ENSMUST00000187674 480 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx39aQ8VDW0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Gm7851-201ENSMUST00000117574 323 ntBASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Gm11511-201ENSMUST00000118146 540 ntBASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Gm5733-201ENSMUST00000190232 939 ntBASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx39aQ8VDW0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx39aQ8VDW0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx39aQ8VDW0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx39aQ8VDW0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx39aQ8VDW0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx39aQ8VDW0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx39aQ8VDW0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms