Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm12799-201ENSMUST00000118151 2560 ntBASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm21470-201ENSMUST00000187680 696 ntBASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 AC154352.1-201ENSMUST00000221477 2365 ntBASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Gm19040-201ENSMUST00000203280 4726 ntBASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Gm27306-201ENSMUST00000183970 107 ntBASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Rgr-203ENSMUST00000225070 4704 ntBASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc9Q8VC31 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Gm13223-201ENSMUST00000118609 747 ntBASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Gm9063-201ENSMUST00000223299 582 ntBASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms