Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Rmrp-201ENSMUST00000157463 271 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Gm9211-201ENSMUST00000182882 975 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Gm9555-201ENSMUST00000200908 583 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.18□□□□□ -0.46
Zcchc9Q8R1J3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm15711-201ENSMUST00000118889 535 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 AY036118-201ENSMUST00000200021 923 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc9Q8R1J3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc9Q8R1J3 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms