Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm13736-201ENSMUST00000119272 253 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm11814-201ENSMUST00000119515 929 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm27892-201ENSMUST00000185017 106 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm39404-201ENSMUST00000216350 313 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm8420-201ENSMUST00000097103 598 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lysmd4Q8CC84 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm15806-201ENSMUST00000120696 955 ntBASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm22331-201ENSMUST00000158066 136 ntBASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gm22058-201ENSMUST00000083393 310 ntBASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lysmd4Q8CC84 BC043934-202ENSMUST00000185694 2356 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms