Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm27956-201ENSMUST00000175604 260 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm12906-201ENSMUST00000154610 441 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm44315-201ENSMUST00000203041 219 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm13286-201ENSMUST00000117750 537 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Mir1905-201ENSMUST00000122779 82 ntBASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cfap54Q8C6S9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Gm13117-201ENSMUST00000120894 691 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Gm13981-201ENSMUST00000122360 447 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Gm43854-201ENSMUST00000200418 394 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cfap54Q8C6S9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.33□□□□□ -0.59
Cfap54Q8C6S9 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cfap54Q8C6S9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms