Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm27486-201ENSMUST00000184923 80 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm11814-201ENSMUST00000119515 929 ntBASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm18187-201ENSMUST00000196476 984 ntBASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tsen54Q8C2A2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tsen54Q8C2A2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms